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Series GSE71411 Query DataSets for GSE71411
Status Public on Feb 13, 2018
Title Transcriptome Analysis of Esophageal Squamous Cell Carcinoma by using Next Generation Sequencing
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We obtained transcriptome profiling (SAGE-seq) of esophageal squamous cell carcinoma (ESCC) and normal tissue specimens by using next generation sequencing.
 
Overall design Comparison of expression pfofiles between ESCC and normal mucosa.
 
Contributor(s) Otsubo T, Oshima K, Iida K, Nishikata K, Toyoda T, Hattori M, Dohi T, Kawamura YI
Citation(s) 29137437
Submission date Jul 28, 2015
Last update date May 15, 2019
Contact name noriko nishi
Organization name Axiohelix Co. Ltd.
Street address 5-11 hakozaki 5F Yunibasaru Bldg
City tyuo-ku
State/province Tokyo
ZIP/Postal code 103-0015
Country Japan
 
Platforms (1)
GPL16558 AB 5500 Genetic Analyzer (Homo sapiens)
Samples (2)
GSM1833847 HS16
GSM1833848 HS17
This SubSeries is part of SuperSeries:
GSE71412 Integrated analysis of methylome and transcriptome of Esophageal Squamous Cell Carcinoma by using Next Generation Sequencing
Relations
BioProject PRJNA291311
SRA SRP061684

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE71411_RAW.tar 27.7 Mb (http)(custom) TAR (of BEDGRAPH, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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