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Series GSE71637 Query DataSets for GSE71637
Status Public on Mar 29, 2016
Title TCR signal strength controls thymic differentiation of discrete proinflammatory γδT cell subsetsistinct TCR signal strength requirements in the thymus
Organism Mus musculus
Experiment type Expression profiling by array
Summary The murine thymus produces discrete γδ T cell subsets making either IFN-γ or IL-17, but the role of the TCR in this developmental process remains controversial. Here we generated a non-transgenic and polyclonal model of reduced TCR expression and signal strength selectively on γδ T cells. Mice haploinsufficient for both CD3γ and CD3δ (CD3DH) showed normal αβ thymocyte subsets but specific defects in γδ T cell development, namely impaired differentiation of IL-17-producing embryonic Vγ6+ (but not adult Vγ4+) γδ T cells and a marked depletion of IFN-γ-producing CD122+ NK1.1+ (Vγ1-biased) γδ T cells throughout life. As result, adult CD3DH mice showed defective peripheral IFN-γ responses and were resistant to experimental cerebral malaria. Thus, strong TCR signaling is required within specific developmental windows with distinct Vγ usage and differential cytokine production by effector γδ T cell subsets.
 
Overall design We investigated the transcriptional changes associated with reduced TCRγδ signaling in the CD3DH model. Transcriptome-wide analysis of FACS-purified CD3DH or WT γδ thymocytes from E18 or 6-week was carried looking for patterns of gene expression during ontogeny
 
Contributor(s) Muñoz-Ruiz M, Ribot JC, Grosso AR, Gonçalves-Sousa N, Pamplona A, Pennington DJ, Regueiro JR, Fernandez-Malavé E, Silva-Santos B
Citation(s) 27043412
Submission date Aug 03, 2015
Last update date Mar 08, 2018
Contact name Ana Rita Grosso
E-mail(s) argrosso@fct.unl.pt
Organization name Unidade de Ciências Biomoleculares Aplicadas (UCIBIO)/Faculdade de Ciências e Tecnologia - Universidade Nova de Lisboa
Department Departamento Ciências da Vida
Lab Computational Multi-omics Lab
Street address Campus de Caparica
City Almada
ZIP/Postal code 2829-516
Country Portugal
 
Platforms (1)
GPL17400 [MoGene-2_1-st] Affymetrix Mouse Gene 2.1 ST Array [transcript (gene) version]
Samples (4)
GSM1842155 Mm_S1_EmWT_B836_bssilva_IMM_JS
GSM1842156 Mm_S2_EmDG_B837_bssilva_IMM_JS
GSM1842157 Mm_S3_AdWT_B838_bssilva_IMM_JS
Relations
BioProject PRJNA291693

Download family Format
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE71637_RAW.tar 22.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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