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Status |
Public on Feb 02, 2016 |
Title |
Quantification of RNA editing in MEF cells of different genetic backgrounds with and without interferon treatment |
Organism |
Mus musculus |
Experiment type |
Other
|
Summary |
We report the application of mmPCR-seq to mouse embryonic fibroblasts. We quantified RNA editing at 557 different loci using a microfluidic multiplex PCR method coupled with deep sequencing.
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Overall design |
RT-PCR amplification of 557 loci from 6 MEF lines with and without interferon treatment to quantify RNA editing levels.
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Contributor(s) |
Ramaswami G, Samuel C |
Citation(s) |
26817845 |
Submission date |
Aug 07, 2015 |
Last update date |
May 15, 2019 |
Contact name |
Gokul Ramaswami |
E-mail(s) |
gokulr@stanford.edu
|
Organization name |
Stanford University
|
Street address |
300 Pasteur Drive Alway M305
|
City |
Stanford |
State/province |
CA |
ZIP/Postal code |
94305 |
Country |
USA |
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Platforms (1) |
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Samples (24)
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Relations |
BioProject |
PRJNA292295 |
SRA |
SRP062161 |