|
| Status |
Public on Feb 04, 2016 |
| Title |
Aberrant epigenetic regulation in clear cell sarcoma of the kidney (CCSK) |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by array
|
| Summary |
Methylation array analyses of 30 CCSKs in comparison with 18 Wilms tumours and normal non-malignant kidneys (2 foetal kidneys and 6 adult kidneys) revealed CCSK tumour DNA to be globally hypermethylated.
Four CCSKs, two WTs, two foetal kidneys and 2 adult kidneys were analysed as technical duplicates on different arrays.
|
| |
|
| Overall design |
Bisulphite converted DNA was hybridised to the Illumina Infinium HumanMethylation27k array at the SCIBLU Lund University Sweden (http://www.lth.se/sciblu). The samples were analysed on three different arrays.
|
| |
|
| Contributor(s) |
Karlsson J, Valind A, Jansson C, O’Sullivan MJ, Holmquist Mengelbier L, Gisselsson D |
| Citation(s) |
26848979 |
| Submission date |
Sep 18, 2015 |
| Last update date |
May 09, 2016 |
| Contact name |
Jenny Karlsson |
| E-mail(s) |
jenny.karlsson@med.lu.se
|
| Organization name |
Lund University
|
| Department |
Clinical genetics
|
| Street address |
BMC C13
|
| City |
Lund |
| ZIP/Postal code |
SE 221 84 |
| Country |
Sweden |
| |
|
| Platforms (1) |
| GPL8490 |
Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2) |
|
| Samples (66)
|
|
| Relations |
| BioProject |
PRJNA296327 |
Less...
More...