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Series GSE74925 Query DataSets for GSE74925
Status Public on Nov 13, 2015
Title eQTL in HBV-related liver samples
Organism Homo sapiens
Experiment type Expression profiling by array
Summary 31 non-tumor liver tissues from 31 HBV-related HCC patients
 
Overall design We performed correlation analyses between the SNPs genotypes and the mRNA expression levels to evaluate whether a SNP serves as an expression quantitative trait locus (eQTL) with putative cis regulatory effects on gene expression traits in liver tissues. The intensity of all gene array experiments were normalized together using the Robust Multiarray Averaging (RMA) method.
This submission represents mRNA expression component of study.
 
Contributor(s) Zhou G, Zhang H, Li Y
Citation(s) 27244555
Submission date Nov 12, 2015
Last update date Feb 18, 2019
Contact name Yuanfeng Li
E-mail(s) 13110720042@fudan.edu.cn
Phone 13810110737
Organization name Beijing Institute of Radiation Medicine
Street address No.38 shengmingyuan Road
City Beijing
ZIP/Postal code 102206
Country China
 
Platforms (1)
GPL5175 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
Samples (31)
GSM1937862 HCC001N
GSM1937863 HCC002N
GSM1937864 HCC003N
Relations
BioProject PRJNA301938

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE74925_RAW.tar 665.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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