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Series GSE75312 Query DataSets for GSE75312
Status Public on Dec 31, 2017
Title Affymetrix SNP array data for samples of 9 members of a FNMTC family
Organism Homo sapiens
Experiment type SNP genotyping by SNP array
Summary Familial nonmedullary thyroid cancer (FNMTC) is a disease with the inheritance pattern is autosomal dominant with incomplete penetrance, but the causative gene is not clear. To identify the disease related locus in the FNMTC family, whole-genome SNPs of nine family members (five affected and four unaffected) were genotyped. We analyzed the SNP data with a novel method and mapped the disease-causing gene to several regions on the whole genome.
 
Overall design Affymetrix SNP arrays were performed according to the manufacturer's directions on DNA extracted from peripheral blood samples.
 
Contributor(s) Yu Y, Liu C
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Nov 23, 2015
Last update date Nov 27, 2018
Contact name Liu Chang
E-mail(s) changsuoyuyan@126.com
Phone 86-22-23503920
Organization name Nankai University
Department College of Life Science
Street address 94 Weijin Road
City Tianjin
ZIP/Postal code 300071
Country China
 
Platforms (1)
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
Samples (9)
GSM1949197 affected member 12
GSM1949198 normal member 21
GSM1949199 affected member 22
Relations
BioProject PRJNA303172

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE75312_RAW.tar 258.6 Mb (http)(custom) TAR (of CEL)
GSE75312_SNP_calls.xls.gz 3.5 Mb (ftp)(http) XLS
Processed data are available on Series record

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