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Series GSE75856 Query DataSets for GSE75856
Status Public on May 13, 2016
Title H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation [Cbx2_ChIP]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary The goal of this study is to understand the genome-wide alterations in chromatin landscape induced by a histone mutation (H3.3K36M) derived from chondroblastomas
 
Overall design Examination of genome-wide Cbx2 distribution in cells expressing H3.3WT and H3.3K36M.
 
Contributor(s) Lu C, Lewis PW, Jain SU
Citation(s) 27174990
Submission date Dec 09, 2015
Last update date May 15, 2019
Contact name Peter W Lewis
E-mail(s) pwlewis2@wisc.edu
Phone 608-316-4388
Organization name University of Wisconsin-Madison
Department Department of Biomolecular Chemistry
Lab Room 2174, Wisconsin Institute for Discovery
Street address 330 N Orchard Street
City Madison
State/province Wisconsin
ZIP/Postal code 53715
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (3)
GSM1968942 Input_DNA_H3.3WT
GSM1968943 Cbx2_ChIPseq_H3.3WT
GSM1968944 Cbx2_ChIPseq_H3.3K36M
This SubSeries is part of SuperSeries:
GSE69291 H3K36 mutations promote sarcomagenesis through genome-wide remodeling of H3K36 and H3K27 methylation
Relations
BioProject PRJNA305538
SRA SRP067191

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE75856_rpkmCounts_Cbx2_WT_K36M.txt.gz 36.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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