|
| Status |
Public on May 01, 2016 |
| Title |
Genome-wide identification of snoRNA-guided 2’-O-methylation sites [CLIP-seq] |
| Organism |
Homo sapiens |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
We combine two experimental high-throughput sequencing methods to identify new 2'-O-methylation sites in human and assign snoRNA guides to sites with previously unknown guides.
|
| |
|
| Overall design |
CLIP-Seq profiling for snoRNP core protein Fibrillarin in HEK293 cells.
|
| |
|
| Contributor(s) |
Gumienny R, Jedlinski DJ, Zavolan M |
| Citation(s) |
28031372 |
| Submission date |
Jan 20, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Rafal Gumienny |
| E-mail(s) |
r.gumienny@unibas.ch
|
| Organization name |
University of Basel
|
| Department |
Biozentrum
|
| Street address |
Im Ettingerhof 8
|
| City |
Basel |
| State/province |
CH |
| ZIP/Postal code |
4055 |
| Country |
Switzerland |
| |
|
| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (1) |
|
| This SubSeries is part of SuperSeries: |
| GSE77028 |
Genome-wide identification of snoRNA-guided 2?-O-methylation sites with CLIP and Ribometh-seq |
|
| Relations |
| BioProject |
PRJNA309297 |
| SRA |
SRP068672 |
