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| Status |
Public on Apr 05, 2016 |
| Title |
Affymetrix SNP6.0 array data for EBF1-PDGFRB rearranged acute lymphoblastic leukemia |
| Organism |
Homo sapiens |
| Experiment type |
Genome variation profiling by SNP array
|
| Summary |
The EBF1-PDGFRB gene fusion accounts for <1% B-cell precursor acute lymphoblastic leukaemia and occurs within the Philadelphia-like ALL subtype. We performed Affymetrix SNP 6.0 array was undertaken patients who tested positive for EBF1-PDGFRB rearrangement by FISH and/or RT-PCR.
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| |
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| Overall design |
We performed Affymetrix SNP 6.0 array on genomic DNA extracted from bone marrow samples taken at diagnosis in 9 patients, at relapse in one patient and at remission in one patient.
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| |
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| Contributor(s) |
Schwab C, Harrison C |
| Citation(s) |
26872634 |
| Submission date |
Feb 03, 2016 |
| Last update date |
Nov 27, 2018 |
| Contact name |
Claire Joanne Schwab |
| E-mail(s) |
claire.schwab@newcastle.ac.uk
|
| Organization name |
Newcastle University
|
| Department |
Northern Institute for Cancer Research
|
| Lab |
Leukaemia Research Cytogenetic Group
|
| Street address |
Level 5, Sir James Spence Institute, Queen Victoria Rd
|
| City |
Newcastle upon Tyne |
| State/province |
Tyne and Wear |
| ZIP/Postal code |
NE1 4LP |
| Country |
United Kingdom |
| |
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| Platforms (1) |
| GPL6801 |
[GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array |
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| Samples (11)
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| Relations |
| BioProject |
PRJNA310784 |
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