|
| Status |
Public on May 18, 2007 |
| Title |
Gene expression in thymic CD4 T cells: effects of Foxp3 |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
|
| Summary |
This data set is comprised of all thymic T cell subsets presented in this manuscript. These include T-N, T-25, T-FN and T-R thymocytes.
Keywords: cell type comparison, development
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| |
|
| Overall design |
Detailed methods are presented in the manuscript and in the attached Supplementary Information. All RNA samples were derived from cells immediately after isolation from mice. Note that these samples were amplified and labeled with Affymetrix and Enzo reagents, while peripheral T cell samples were amplified and labeled with Ambion reagents.
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| |
|
| Contributor(s) |
Gavin MA, Rasmussen JP, Fontenot JD, Vasta V, Manganiello VC, Beavo JA, Rudensky AY |
| Citation(s) |
17220874 |
| Submission date |
May 09, 2007 |
| Last update date |
Feb 11, 2019 |
| Contact name |
Alexander Rudensky |
| Organization name |
University of Washington
|
| Department |
Immunology
|
| Street address |
1959 Pacific St
|
| City |
Seattle |
| State/province |
WA |
| ZIP/Postal code |
98195 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL1261 |
[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array |
|
| Samples (4)
|
| GSM188246 |
GFP- CD25- CD4+ CD8- thymocytes from Foxp3(gfp/gfp) mice |
| GSM188247 |
GFP- CD25+ CD4+ CD8- thymocytes from Foxp3(gfp/gfp) mice |
| GSM188248 |
GFP+ CD4+ CD8- thymocytes from Foxp3(gfpko/wt) mice |
| GSM188249 |
GFP+ CD4+ CD8- thymocytes from Foxp3(gfp/gfp) mice |
|
| This SubSeries is part of SuperSeries: |
| GSE7773 |
Foxp3-dependent programme of regulatory T-cell differentiation |
|
| Relations |
| BioProject |
PRJNA105489 |
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