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Series GSE78057 Query DataSets for GSE78057
Status Public on Feb 19, 2016
Title Expression data from IMQ-induced psoriasis-like skin inflammation in miR-146a-/- and C57BL6J mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary miR-146a acts as a negative feedback regulator of inflammation. To investigate the role of miR-146a in psoriasis psoriasiform skin inflammation was indeuced in Mir-146a-/- and wild type mice (C57BL6J) by topical applciation of imiquimod (IMQ)-cream (Aldara).
Gene expression profiling (Affymetrix) was used to identify transcriptomic changes associated with psoriasis-like skin inflammation in wild type vs. miR-146a -/-mice.
 
Overall design A daily topical dose of 31.25 mg of Aldara cream (5% IMQ) was applied on the right ear of miR-146a -/- and C57BL/6 mice on three consecutive days to induce psorisis-like skin inflammation. Mice were sacrificed at day 4. Ear flaps were collected for total RNA extraction and hybridization on Affymatrix GeneTitan plate format Gene ST 2.1 (mouse).
 
Contributor(s) Srivastava A, Sonkoly E, Pivarcsi A
Citation(s) 27568078
Submission date Feb 18, 2016
Last update date Aug 28, 2018
Contact name Ankit Srivastava
E-mail(s) ankit.srivastava@ki.se
Phone +46767563207
Organization name Karolinska Institutet
Department Department of Medicine
Lab Molecular Dermatology Research Group
Street address CMM L8:02
City Stockholm
State/province - Select a State -
ZIP/Postal code 17176
Country Sweden
 
Platforms (1)
GPL17400 [MoGene-2_1-st] Affymetrix Mouse Gene 2.1 ST Array [transcript (gene) version]
Samples (16)
GSM2065767 WT-CTRL-Ear-1
GSM2065768 WT-CTRL-Ear-2
GSM2065769 WT-CTRL-Ear-3
Relations
BioProject PRJNA312479

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Supplementary file Size Download File type/resource
GSE78057_Annotation.xlsx 1.3 Mb (ftp)(http) XLSX
GSE78057_RAW.tar 69.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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