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Series GSE78587 Query DataSets for GSE78587
Status Public on Mar 18, 2016
Title polyA mRNA RNA-seq from skeletal muscle myoblast (ENCSR000COY)
Project ENCODE
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq on human HSMM whole cell long polyA+ RNA

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR000COY/
 
Citation(s) 22955616
BioProject PRJNA30709
Submission date Feb 25, 2016
Last update date May 15, 2019
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
Samples (2)
GSM2072421 polyA mRNA RNA-seq from skeletal muscle myoblast (ENCLB555AWH)
GSM2072422 polyA mRNA RNA-seq from skeletal muscle myoblast (ENCLB555AWI)
Relations
Supersedes GSM758578

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE78587_ENCFF000GOJ_contigs_hg19.bigBed 17.2 Mb (ftp)(http) BIGBED
GSE78587_ENCFF000GOK_exon_quantifications_hg19.gtf.gz 6.0 Mb (ftp)(http) GTF
GSE78587_ENCFF000GOM_exon_quantifications_hg19.gtf.gz 18.7 Mb (ftp)(http) GTF
GSE78587_ENCFF000GOS_gene_quantifications_hg19.gtf.gz 957.0 Kb (ftp)(http) GTF
GSE78587_ENCFF000GOU_gene_quantifications_hg19.gtf.gz 842.8 Kb (ftp)(http) GTF
GSE78587_ENCFF000GOW_gene_quantifications_hg19.gtf.gz 2.0 Mb (ftp)(http) GTF
GSE78587_ENCFF000GOY_splice_junctions_hg19.bigBed 9.7 Mb (ftp)(http) BIGBED
GSE78587_ENCFF000GPI_transcript_quantifications_hg19.gtf.gz 11.1 Mb (ftp)(http) GTF
GSE78587_ENCFF000GPK_transcript_quantifications_hg19.gtf.gz 1.2 Mb (ftp)(http) GTF
GSE78587_ENCFF000GPM_transcript_quantifications_hg19.gtf.gz 5.0 Mb (ftp)(http) GTF
GSE78587_ENCFF234JGT_splice_junctions_hg19.bed.gz 8.2 Mb (ftp)(http) BED
GSE78587_ENCFF768YFB_contigs_hg19.bed.gz 10.4 Mb (ftp)(http) BED
GSE78587_RAW.tar 3.1 Gb (http)(custom) TAR (of BIGWIG, TSV, TXT)
SRA Run SelectorHelp
Raw data provided as supplementary file
Processed data provided as supplementary file
Processed data are available on Series record

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