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| Status |
Public on Aug 14, 2009 |
| Title |
Expression data from renal cysts of autosomal dominant polycystic kidney disease (ADPKD) patients |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
To elucidate the molecular pathways that modulate renal cyst growth in autosomal dominant polycystic kidney disease (ADPKD)
Keywords: Disease state analysis
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| Overall design |
We performed global gene profiling on renal cysts of different size (small cysts: less than 1 ml, n=5; medium cysts: between 10-25 ml, n=5; large cysts: greater than 50 ml, n=3) and minimally cystic tissue (MCT, n=5) from five PKD1 polycystic kidneys. Additionally, non-cancerous renal cortical tissue from three nephrectomized kidneys with isolated renal cell carcinoma was used as normal control tissue (n=3)
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| Contributor(s) |
Pei Y |
| Citation(s) |
19346236, 23524344 |
| Submission date |
May 22, 2007 |
| Last update date |
Jun 27, 2019 |
| Contact name |
York PC Pei |
| E-mail(s) |
york.pei@uhn.ca
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| Phone |
416-340-4257
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| Organization name |
University of Toronto
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| Department |
Department of Medicine
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| Street address |
8N838, 585 University Avenue
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| City |
Toronto |
| State/province |
Ontario |
| ZIP/Postal code |
M5G2N2 |
| Country |
Canada |
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| Platforms (1) |
| GPL570 |
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array |
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| Samples (21)
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| GSM190858 |
PKD1 renal cyst, small cyst_1, < 1ml |
| GSM190859 |
PKD1 renal cyst, small cyst_2, < 1ml |
| GSM190860 |
PKD1 renal cyst, small cyst_3, < 1ml |
| GSM190861 |
PKD1 renal cyst, small cyst_4, < 1ml |
| GSM190862 |
PKD1 renal cyst, small cyst_5, < 1ml |
| GSM190863 |
PKD1 renal cyst, medium cyst_1, 23 ml |
| GSM190864 |
PKD1 renal cyst, medium cyst_2, 20 ml |
| GSM190865 |
PKD1 renal cyst, medium cyst_3, 11 ml |
| GSM190866 |
PKD1 renal cyst, medium cyst_4, 15 ml |
| GSM190867 |
PKD1 renal cyst, medium cyst_5, 19 ml |
| GSM190868 |
PKD1 renal cyst, large cyst_1, 60 ml |
| GSM190869 |
PKD1 renal cyst, large cyst_2, 50 ml |
| GSM190870 |
PKD1 renal cyst, large cyst_3, 100 ml |
| GSM190871 |
minimally cystic tissue_1 |
| GSM190872 |
minimally cystic tissue_2 |
| GSM190873 |
minimally cystic tissue_3 |
| GSM190874 |
minimally cystic tissue_4 |
| GSM190875 |
minimally cystic tissue_5 |
| GSM190876 |
normal renal cortical tissue_1 |
| GSM190877 |
normal renal cortical tissue_2 |
| GSM190878 |
normal renal cortical tissue_3 |
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| Relations |
| BioProject |
PRJNA100011 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE7869_RAW.tar |
102.5 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
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