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Series GSE80456 Query DataSets for GSE80456
Status Public on Nov 20, 2016
Title Chromatin remodeling during in vivo neural stem cells differentiating to neurons in early Drosophila embryos [RNA-seq]
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary Expression profiles of affinity-purified nuclei of neural stem cells (NSCs) and neurons from the Drosophila embryos.
 
Overall design Expression profiles were generated from NSC and neuron nuclei, which isolated from 5–7h-old Sca-Gal4/cyo;UAS-3xFLAG-blrp-mCherry-RanGap and 12–14h-old Elav-Gal4;UAS-3xFLAG-blrp-mCherry-RanGap D. melanogaster embryos using the method INTACT (Steinner et al., 2012). We examined the changes in gene expression during Drosophila embryonic neuron differentiation.
 
Contributor(s) Ye Y, Jiang C
Citation(s) 27858939, 31195140
Submission date Apr 20, 2016
Last update date Nov 12, 2019
Contact name Youqiong Ye
E-mail(s) youqye@gmail.com
Phone +8613661565591
Organization name Shanghai Jiao Tong University School of Medicine
Street address 280 Chongqing south road
City Shanghai
ZIP/Postal code 200025
Country China
 
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (2)
GSM2127636 NSC.RNA
GSM2127637 neuron.RNA
This SubSeries is part of SuperSeries:
GSE80458 Chromatin remodeling during in vivo neural stem cells differentiating to neurons in early Drosophila embryos
Relations
BioProject PRJNA318981
SRA SRP073600

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE80456_NSC_neuron.FPKM.txt.gz 152.8 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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