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Series GSE82339 Query DataSets for GSE82339
Status Public on Jun 30, 2016
Title LncRNA Chaer contributes to the transcriptome reprogramming during phenylephrine-induced hypertrophy in neonatal rat ventricular myocytes
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary We compared the transcriptome modified by siRNA-mediated cardiac hypertrophy associated epigenentic regulator (Chaer) with negative control siRNA treated neonatal rat ventricular myocytes with or without phenylephrine treatment. The results suggest that Chaer knockdown broadly blocks the phenylephrine-induced hypertrophic programming of the transcriptome.
 
Overall design Transcripts profiles from neonatal rat ventricular myocytes with or without phenylephrine and with or without Chaer-specific siRNA compared to negative control siRNA
 
Contributor(s) Wang Z, Cass A, Xiao XG, Wang Y
Citation(s) 27618650
Submission date Jun 07, 2016
Last update date May 15, 2019
Contact name Yibin Wang
Organization name University of California Los Angeles
Street address BH-569 CHS, Box 957115
City Los Angeles
State/province Ca
ZIP/Postal code 90095
Country USA
 
Platforms (1)
GPL18694 Illumina HiSeq 2500 (Rattus norvegicus)
Samples (4)
GSM2190719 siNeg
GSM2190720 siChaer
GSM2190721 siNeg PE
Relations
BioProject PRJNA324677
SRA SRP076227

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE82339_RAW.tar 920.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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