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| Status |
Public on Sep 20, 2016 |
| Title |
HP1 |
| Organism |
Drosophila melanogaster |
| Experiment type |
Expression profiling by high throughput sequencing
Other
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
27777628 |
| Submission date |
Jun 24, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Bas van Steensel |
| E-mail(s) |
b.v.steensel@nki.nl
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| Phone |
+ 31 20 512 2040
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| Fax |
+31 20 669 1383
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| URL |
http://www.nki.nl/nkidep/vansteensel
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| Organization name |
Netherlands Cancer Institute
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| Department |
division of Molecular Biology
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| Lab |
van Steensel group
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| Street address |
Plesmanlaan 121
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| City |
Amsterdam |
| ZIP/Postal code |
1066 CX |
| Country |
Netherlands |
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| Platforms (3) |
| GPL13304 |
Illumina HiSeq 2000 (Drosophila melanogaster) |
| GPL16479 |
Illumina MiSeq (Drosophila melanogaster) |
| GPL17275 |
Illumina HiSeq 2500 (Drosophila melanogaster) |
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| Samples (30)
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| GSM2213947 |
Dam-HP1a repl 2 |
| GSM2213948 |
D2, cDNA reads, Gal4-HP1, repl 1 |
| GSM2213949 |
D2, cDNA reads, Gal4-HP1, repl 2 |
| GSM2213950 |
D2, cDNA reads, Gal4, repl 1 |
| GSM2213951 |
D2, cDNA reads, Gal4, repl 2 |
| GSM2213952 |
D2, cDNA reads, HP1, repl 1 |
| GSM2213953 |
D2, cDNA reads, HP1, repl 2 |
| GSM2213954 |
D2, gDNA reads, Gal4-HP1, repl 1 |
| GSM2213955 |
D2, gDNA reads, Gal4-HP1, repl 2 |
| GSM2213956 |
D2, gDNA reads, Gal4, repl 1 |
| GSM2213957 |
D2, gDNA reads, Gal4, repl 2 |
| GSM2213958 |
D2, gDNA reads, HP1, repl 1 |
| GSM2213959 |
D2, gDNA reads, HP1, repl 2 |
| GSM2213960 |
D16, cDNA reads, Gal4-HP1, repl 1 |
| GSM2213961 |
D16, cDNA reads, Gal4-HP1, repl 2 |
| GSM2213962 |
D16, cDNA reads, Gal4, repl 1 |
| GSM2213963 |
D16, cDNA reads, Gal4, repl 2 |
| GSM2213964 |
D16, cDNA reads, HP1, repl 1 |
| GSM2213965 |
D16, cDNA reads, HP1, repl 2 |
| GSM2213966 |
D16, gDNA reads, Gal4-HP1, repl 1 |
| GSM2213967 |
D16, gDNA reads, Gal4-HP1, repl 2 |
| GSM2213968 |
D16, gDNA reads, Gal4, repl 1 |
| GSM2213969 |
D16, gDNA reads, Gal4, repl 2 |
| GSM2213970 |
D16, gDNA reads, HP1, repl 1 |
| GSM2213971 |
D16, gDNA reads, HP1, repl 2 |
| GSM2213972 |
mapping reads |
| GSM2213973 |
spike-in gDNA reads |
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| This SuperSeries is composed of the following SubSeries: |
| GSE83713 |
Genome-wide HP1a occupancy measured by DamID-seq |
| GSE83714 |
Context-dependent effects of HP1 assessed in high throughput |
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| Relations |
| BioProject |
PRJNA326779 |
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