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Series GSE85683 Query DataSets for GSE85683
Status Public on Aug 17, 2016
Title The effect of IKKβ on estrogen receptor positive breast cancer phenotypes
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Estrogen receptor α (ER) is a good prognostic marker expressed in ~75% of breast tumors. Women with ER+ tumors will receive endocrine therapy, yet ~50% will experience relapse and late recurrence ~5-20 years after primary diagnosis.
The recurrent tumors are often aggressive, resistant, and metastatic. A growing body of evidence suggests that an inflammatory microenvironment and the activation of the NF-ĸB pathway are highly associated with the progression of ER+ tumors
to more aggressive stages. However, it is unknown whether NF-ĸB is a driver or a consequence of aggressive ER+ disease. In order to study this, we developed multiple ER+ breast cancer cell lines expressing a Doxycycline-inducible, constitutively
active form of IĸB kinase β (CA-IKKβ), a key kinase in the canonical NF-ĸB pathway. This allowed us to specifically activate the canonical arm of the NF-ĸB pathway in a controlled fashion.
 
Overall design Constitutively active IKK β-MCF-7 cells are treated with Estrogen (E2), Doxycycline (Dox) or E2+Dox for 72 hrs.The study includes four groups: Vehicle, E2, Dox and E2+Dox with three replicates per group.
 
Contributor(s) Frasor J, El-Shennawy L
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Submission date Aug 16, 2016
Last update date Aug 23, 2018
Contact name Jonna Frasor
E-mail(s) jfrasor@uic.edu
Organization name University of Illinois at Chicago
Department Physiology and Biophysics
Lab Jonna Frasor
Street address 835 S. Wolcott MC901
City Chicago
State/province IL
ZIP/Postal code 60612
Country USA
 
Platforms (1)
GPL15207 [PrimeView] Affymetrix Human Gene Expression Array
Samples (12)
GSM2281295 Vehicle_1
GSM2281296 Vehicle_2
GSM2281297 Vehicle_3
Relations
BioProject PRJNA339054

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE85683_RAW.tar 24.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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