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Series GSE86984 Query DataSets for GSE86984
Status Public on Jun 12, 2017
Title Gene expression profile in freshly isolated monocytes from patients with diffuse cutaneous scleroderma (dcSSc) compared to healthy donors (HDs)
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Monocytes/macrophages are activated in several autoimmune diseases, including systemic sclerosis (scleroderma, SSc), with increased expression of IFN-regulatory genes and inflammatory cytokines, suggesting dysregulation of the innate immune response in autoimmunity. Recently, we found that EBV is deregulated in SSc with abnormal expression of viral lytic-genes in PBMCs and skin. Since monocytes/macrophages are involved in innate immune recognition of EBV/lytic infection, we sought to determine whether EBV might contribute to their activation in SSc.
In this study, using recombinant-EBV we infected monocytes from SSc and healthy donors (HDs), we found that viral replication is essential for inducing the expression of TLR8 in EBV-infected primary monocytes. Markers of activated monocytes, such as IFN-regulated genes and chemokines, were up-regulated in SSc- and HD-EBV-infected monocytes. Inhibiting TLR8 expression reduced virally-induced-TLR8 in THP-1 infected cells, demonstrating that innate immune activation by infectious EBV is partially dependent on TLR8. Viral lytic-mRNA and -proteins were detected in freshly isolated SSc monocytes. Microarray analysis substantiated the evidence of an increased IFN signature and altered level of TLR8 expression in SSc monocytes carrying infectious EBV compared to HD monocytes.
 
Overall design Four dcSSc monocytes tested positive for EBV lytic genes were compared to age-matched monocytes from HDs.
 
Contributor(s) Farina GA
Citation(s) 28245863
Submission date Sep 15, 2016
Last update date Jun 25, 2019
Contact name Boston University Microarray and Sequencing Resource
E-mail(s) msrdata@bu.edu
Organization name Boston University
Department Microarray and Sequencing Resource
Street address 72 East Concord Street, E631
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platforms (1)
GPL17930 [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [HuGene20stv1_Hs_ENTREZG_17.0.0]
Samples (8)
GSM2316370 Normal control subject 1
GSM2316371 Normal control subject 2
GSM2316372 Normal control subject 3
Relations
BioProject PRJNA343127

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE86984_RAW.tar 73.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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