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Series GSE87204 Query DataSets for GSE87204
Status Public on Sep 20, 2019
Title Ultrasound-mediated ultra effective cellular reprogramming of human fibroblasts into neural progenitor-like cells [MBD-Seq]
Organism Homo sapiens
Experiment type Methylation profiling by high throughput sequencing
Summary We have developed an ultra effective method of triggering fast cellular reprogramming into neural progenitor cells (NPCs) with significant yields, called ultrasound-directed permeation of environmental transition-guided cellular reprogramming (Entr).
 
Overall design DNA mehtylation profiles of 1-day-old HDF cells in NSC culture medium after ultrasound stimulus. Control and reference cells were used each HDF and hNSC
 
Contributor(s) Lee Y, Heo H, Park Y, Jung W, Park M, Oh S, Kim S
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Submission date Sep 22, 2016
Last update date Sep 21, 2019
Contact name Yong Seung Lee
E-mail(s) inyasio0731@gmail.com
Phone +82-32-290-2778
Organization name Catholic Kwandong University
Department College of Medicine
Street address SimGokro 100gil 25
City Incheon Metropolitan City
ZIP/Postal code 404-834
Country South Korea
 
Platforms (2)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (3)
GSM2325155 HDF
GSM2325156 NSC
GSM2325157 1D n/Entr
This SubSeries is part of SuperSeries:
GSE87205 Ultrasound-mediated ultra effective cellular reprogramming of human fibroblasts into neural progenitor-like cells
Relations
BioProject PRJNA343882
SRA SRP090283

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE87204_CGI_PROMOTER.rms.txt.gz 1.2 Mb (ftp)(http) TXT
GSE87204_RAW.tar 257.9 Mb (http)(custom) TAR (of BIGWIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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