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Series GSE88977 Query DataSets for GSE88977
Status Public on Oct 05, 2017
Title Genomic alterations activating KLF5 [RNA-Seq]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Using RNA-seq to identify genes that regulated by KLF5 and KLF5 mutants
 
Overall design RNA-seq of BICR31 cells treated with siNC or siKLF5. RNA-seq of HCC95 cells over-expressing empty vector, KLF5 WT or KLF5 E419Q.
 
Contributor(s) Zhang X
Citation(s) 28963353
Submission date Oct 20, 2016
Last update date Jul 25, 2021
Contact name Xiaoyang Zhang
Organization name University of Utah
Lab Zhang lab
Street address 1950 CIrcle of Hope
City Salt Lake City
ZIP/Postal code 84112
Country USA
 
Platforms (1)
GPL15520 Illumina MiSeq (Homo sapiens)
Samples (12)
GSM2356673 BICR31-siKLF5-A
GSM2356674 BICR31-siKLF5-B
GSM2356675 BICR31-siKLF5-C
This SubSeries is part of SuperSeries:
GSE88978 Genomic alterations activating KLF5
Relations
BioProject PRJNA349455
SRA SRP091857

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE88977_RAW.tar 15.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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