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GEO accession:
Series GSE90045
Query DataSets for GSE90045
Status
Public on Nov 18, 2016
Title
EPOP interacts with Elongin BC and USP7 to modulate the chromatin landscape
Organisms
Homo sapiens
;
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
27863226
Submission date
Nov 18, 2016
Last update date
May 15, 2019
Contact name
Robert Liefke
E-mail(s)
robert.liefke@imt.uni-marburg.de
Organization name
Philipps University of Marburg
Department
Institute of Molecular Biology and Tumor Research (IMT)
Street address
Hans-Meerwein-Str. 2
City
Marburg
State/province
Hessen
ZIP/Postal code
35043
Country
Germany
Platforms (2)
GPL9052
Illumina Genome Analyzer (Homo sapiens)
GPL9185
Illumina Genome Analyzer (Mus musculus)
Samples (39)
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More...
GSM2027594
ChIP-Seq-mES-EPOP Ab1 Control
GSM2027595
ChIP-Seq-mES-EPOP Ab1 EPOP-KO
GSM2027596
ChIP-Seq-mES-H3K4me3 Control
GSM2027597
ChIP-Seq-mES-H3K4me3 EPOP-KO
GSM2027598
ChIP-Seq-mES-PolIIS5 Control Repl1
GSM2027599
ChIP-Seq-mES-PolIIS5 EPOP-KO Repl1
GSM2027600
ChIP-Seq-mES-ElonginB Control Repl1
GSM2027601
ChIP-Seq-mES-ElonginB EPOP-KO Repl1
GSM2027602
ChIP-Seq-mES-H2Bub Control
GSM2027603
ChIP-Seq-mES-H2Bub EPOP-KO
GSM2027604
ChIP-Seq-mES-Input Control
GSM2027605
ChIP-Seq-mES-Input EPOP-KO
GSM2027606
RNA-Seq-mES-EPOP-KO
GSM2027607
RNA-Seq-mES-RescueWT
GSM2027608
RNA-Seq-mES-RescueL40A
GSM2027609
ChIP-Seq-SH-SY5Y-H3K4me3 Control
GSM2027610
ChIP-Seq-SH-SY5Y-H3K4me3 EPOP-KD
GSM2027611
ChIP-Seq-SH-SY5Y-H3K4me3 EPOP-OE
GSM2091483
ChIP-Seq-mES-EloB Control
GSM2091484
ChIP-Seq-mES-EloB EloB-KO
GSM2091485
ChIP-Seq-mES-H3K4me3 Control (For EloB KO)
GSM2091486
ChIP-Seq-mES-H3K4me3 EloB-KO
GSM2091487
ChIP-Seq-mES-H2Bub Control (For EloB KO)
GSM2091488
ChIP-Seq-mES-H2Bub EloB-KO
GSM2091526
ChIP-Seq-mES-EPOP Ab2 Control
GSM2091527
ChIP-Seq-mES-EPOP Ab2 EPOP-KO
GSM2091528
ChIP-Seq-mES-EPOP Ab3 Control
GSM2091529
ChIP-Seq-mES-EPOP Ab3 EPOP-KO
GSM2091530
ChIP-Seq-mES-ElonginB Control Repl2
GSM2091531
ChIP-Seq-mES-ElonginB EPOP-KO Repl2
GSM2091532
ChIP-Seq-SH-SY5Y Input
GSM2281269
ChIP-Seq-mES-PolIIS5 Control Repl2
GSM2281270
ChIP-Seq-mES-PolIIS5 EPOP-KO Repl2
GSM2281271
ChIP-Seq-mES-USP7 Control
GSM2281272
ChIP-Seq-mES-USP7 EPOP-KO
GSM2281273
ChIP-Seq-mES-H3K4me3 Control (For USP7 KO)
GSM2281274
ChIP-Seq-mES-H3K4me3 USP7-KO
GSM2281275
ChIP-Seq-mES-H2Bub Control (For USP7 KO)
GSM2281276
ChIP-Seq-mES-H2Bub USP7-KO
This SuperSeries is composed of the following SubSeries:
GSE76536
EPOP interacts with Elongin BC and USP7 to modulate the chromatin landscape (EPOP KO)
GSE79318
EPOP interacts with Elongin BC and USP7 to modulate the chromatin landscape (Elongin B KO)
GSE85681
EPOP interacts with Elongin BC and USP7 to modulate the chromatin landscape (USP7 KO)
Relations
BioProject
PRJNA354401
Download family
Format
SOFT formatted family file(s)
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Supplementary file
Size
Download
File type/resource
GSE90045_RAW.tar
3.0 Gb
(http)
(custom)
TAR (of BW)
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