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| Status |
Public on May 02, 2024 |
| Title |
Generally applicable transcriptome-wide analysis of translational efficiency using anota2seq |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We compare effects platform characteristics on differential translation, i.e. differences between DNA- microarray and RNAsequencing. Using both DNA- microarray and RNAsequencing data we want to elucidate whether mTOR independent insulin induced translation exists.
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| |
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| Overall design |
12h serum starved MCF7 cells treated for 4h with DMSO (control), insulin, insulin + torin1.
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| |
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| Contributor(s) |
Larsson O, topisirovic I, Furic L, Gandin V, Masvidal Sanz L, Lorent J, Murie C, Oertlin C |
| Citation missing |
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| Submission date |
Dec 14, 2016 |
| Last update date |
May 02, 2024 |
| Contact name |
Christian Oertlin |
| E-mail(s) |
christian.oertlin@ki.se
|
| Organization name |
Karolinska Institutet
|
| Street address |
Tomtebodavägen 23A
|
| City |
Stockholm |
| ZIP/Postal code |
17165 |
| Country |
Sweden |
| |
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| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
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| Samples (24)
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| Relations |
| BioProject |
PRJNA357468 |
| SRA |
SRP095121 |
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