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Series GSE92899 Query DataSets for GSE92899
Status Public on Jul 18, 2017
Title Distinct Sets Of Genes Representing Overlapping Biological Functions Are Altered By Intrinsic Properties Of Carbon Nanomaterials In Vitro And In Vivo [human]
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Six different carbon nanomaterials (CNM) administered by oropharyngeal aspiration to C57BL/6 mice (on 4 consecutive days with 10ug of CNM per day in PBS, sacrificed on 5th day) and to differentiated THP-1 cells in culture (6 hour and 24 hour, with 100ug of CNM /ml of medium)
 
Overall design THP-1 cells were grown in 30 ml of RPMI 1640 media, supplemented with 10% fetal bovine serum, 1% penicillin-streptomycin (PEST) antibiotics and 2mM Ultraglutamine. THP-1 cells were differentiated with 50nm PMA (phorbol-12-myristate-13-acetate) and exposed in six-well plates to six different carbon nanomaterials (CNM) by replacing the old media and adding 100 µg of the CNM in 1 ml of fresh complete RPMI and incubated for 6 or 24 hours
 
Contributor(s) Kinaret P, Marwah V, Fortino V, Ilves M, Wolff H, Ruokolainen L, Auvinen P, Savolainen K, Alenius H, Greco D
Citation(s) 28380293
Submission date Dec 23, 2016
Last update date Oct 17, 2017
Contact name Dario Greco
E-mail(s) dario.greco@tuni.fi
Organization name Tampere University
Department Faculty of Medicine and Health Technology
Lab Finnish Hub for Development and Validation of Integrated Approaches (FHAIVE)
Street address Arvo ylpön Katu 34
City Tampere
ZIP/Postal code 33520
Country Finland
 
Platforms (1)
GPL10332 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Feature Number version)
Samples (48)
GSM2439561 SES.24h.1
GSM2439562 rCNT.24h.1
GSM2439563 tCNT.6h.1
This SubSeries is part of SuperSeries:
GSE92901 Distinct Sets Of Genes Representing Overlapping Biological Functions Are Altered By Intrinsic Properties Of Carbon Nanomaterials In Vitro And In Vivo
Relations
BioProject PRJNA358737

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE92899_RAW.tar 7.3 Mb (http)(custom) TAR
GSE92899_raw_data_files.tar.gz 199.3 Mb (ftp)(http) TAR
Processed data included within Sample table

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