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Series GSE93763 Query DataSets for GSE93763
Status Public on Jan 08, 2018
Title Genome-wide maps of metabolic labeled RNA in Drosophila S2 cells.
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary We report the application of ultrashort metabolic labeling of RNA for high-throughput profiling of RNA processing in Drosophila S2 cells.
 
Overall design Examination of 3 different labeling timepoints in Drosophila S2 cells.
 
Contributor(s) Henriques T, Burkholder A, Adelman K, Pai A, Paggi J, Burge C
Citation(s) 29280736
Submission date Jan 18, 2017
Last update date May 15, 2019
Contact name Karen Adelman
E-mail(s) karen_adelman@hms.harvard.edu
Organization name Harvard Medical School
Department Biological Chemistry and Molecular Pharmacology
Street address 45 Shattuck St. LHRRB-201a
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (2)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
GPL17275 Illumina HiSeq 2500 (Drosophila melanogaster)
Samples (11)
GSM2461715 Dmel_S2_4sU-RNA-seq_5min_rep1
GSM2461716 Dmel_S2_4sU-RNA-seq_5min_rep2
GSM2461717 Dmel_S2_4sU-RNA-seq_5min_rep3
Relations
BioProject PRJNA362313
SRA SRP096954

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE93763_RAW.tar 1.2 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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