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| Status |
Public on Apr 25, 2018 |
| Title |
The transcriptome comparison data between Saccharomyces cerevisiae cells in xylose consumption phase after glucose depleted in glucose-xylose co-fermentation and when xylose was the sole carbon source. |
| Organism |
Saccharomyces cerevisiae |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The xylose fermentation rate during xylose consumption phase after glucose depleted in glucose-xylose co-fermentation (defined as GX stage) was much lower than that when xylose was the sole carbon source (defined as X stage). BSGX001 and XH7 are two engineered strains that have the xylose-utilizing capacity. Here,we investigate the transcriptional differences between GX stage and X stage of BSGX001 and XH7, respectively.
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| Overall design |
Samples were taken from the cells in X stage and GX stage respectively. Each strain under each condition had duplicates. Then RNAseq-technology was employed to generate the transcriptome data.
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| Contributor(s) |
Shen Y, Wei S |
| Citation(s) |
29686730 |
| Submission date |
Feb 19, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Yu Shen |
| E-mail(s) |
shenyu@sdu.edu.cn
|
| Phone |
18663753566
|
| Organization name |
Shandong University
|
| Department |
Microbiology and Biotechnology Institute
|
| Lab |
Bao Lab
|
| Street address |
binhai road 72
|
| City |
Qingdao |
| State/province |
Shandong |
| ZIP/Postal code |
266200 |
| Country |
China |
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| Platforms (1) |
| GPL13821 |
Illumina HiSeq 2000 (Saccharomyces cerevisiae) |
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| Samples (8)
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| Relations |
| BioProject |
PRJNA375933 |
| SRA |
SRP100323 |
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