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Series GSE97966 Query DataSets for GSE97966
Status Public on Oct 11, 2017
Title Rat embryonic stem cells produce fertile offspring through tetraploid complementation [RNA-Seq]
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Pluripotency of embryonic stem cells (ESCs) can be functionally assessed according to their developmental potency. Tetraploid complementation, through which an entire organism is produced from donor pluripotent cells, is taken as the most stringent test for pluripotency. It remains unclear whether ESCs from other species besides mice can pass this test. Here we show that the rat ESCs at very early passages are also capable to produce fertile offspring by tetraploid complementation, however, this capacity is rapidly lost during culture due to the loss of genomic imprinting. Our findings support that the naïve ground state pluripotency exists in rat and can be captured in rat ESCs, yet may be subjected to species-specific regulations, which have implications for the derivation and application of naïve pluripotent stem cells in other species including human.
 
Overall design mRNA profiles of different passage rat embryonic stem cells
 
Contributor(s) Li T, Feng G, Li Y, Wang M, Li W, Zhou Q
Citation(s) 29078333
Submission date Apr 19, 2017
Last update date Oct 04, 2019
Contact name Qi Zhou
E-mail(s) zhouqi@ioz.ac.cn
Organization name Institute of Zoology,CAS
Lab Zhou
Street address Datun Road, Chaoyang District
City Beijing
ZIP/Postal code 100101
Country China
 
Platforms (1)
GPL18694 Illumina HiSeq 2500 (Rattus norvegicus)
Samples (4)
GSM2584450 rat_P4_ESC rep1
GSM2584451 rat_P4_ESC rep2
GSM2584452 rat_P14_ESC rep1
This SubSeries is part of SuperSeries:
GSE97970 Rat embryonic stem cells produce fertile offspring through tetraploid complementation
Relations
BioProject PRJNA383538
SRA SRP104261

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE97966_RAW.tar 2.4 Mb (http)(custom) TAR (of FPKM_TRACKING)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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