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Series GSE98223 Query DataSets for GSE98223
Status Public on Aug 07, 2020
Title Genomic distribution of H3T3ph in Drosophila melanogaster S2 cells
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Drosophila Haspin kinase phosphorylates Histone H3 at threonine 3 at centromeric heterochromatin and either lamin- or polycomb-enriched euchromatic regions, being required for nuclear organization of interphase cells and polycomb-dependent gene silencing.
 
Overall design ChIP-seq peak calling of H3T3ph against input sample in Drosophila melanogaster S2 cells
 
Contributor(s) Fresán U, Rodríguez-Sánchez M, Reina O, Espinàs ML
Citation(s) 32750047
Submission date Apr 26, 2017
Last update date Jul 25, 2021
Contact name Oscar Reina Garcia
E-mail(s) oscar.reina@irbbarcelona.org
Organization name IRB Barcelona
Department Biostatistics and Bioinformatics
Street address C/Baldiri Reixac 10
City Barcelona
State/province Barcelona
ZIP/Postal code 08028
Country Spain
 
Platforms (1)
GPL11203 Illumina Genome Analyzer IIx (Drosophila melanogaster)
Samples (2)
GSM2589530 H3T3ph
GSM2589531 input
Relations
BioProject PRJNA384331
SRA SRP105261

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE98223_RAW.tar 230.0 Kb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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