|
| Status |
Public on Dec 18, 2019 |
| Title |
DNA methylation instability by BRAF-mediated TET silencing and lifestyle-exposure divides colon cancer pathways |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Methylation profiling by genome tiling array
Methylation profiling by array
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
31842975 |
| Submission date |
May 03, 2017 |
| Last update date |
Jul 25, 2021 |
| Contact name |
Faiza Noreen |
| E-mail(s) |
faiza.noreen@unibas.ch
|
| Organization name |
University of Basel
|
| Department |
Department of Biomedicine
|
| Street address |
Mattenstrasse 28
|
| City |
Basel |
| ZIP/Postal code |
4058 |
| Country |
Switzerland |
| |
|
| Platforms (4)
|
| GPL8490 |
Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2) |
| GPL13534 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) |
| GPL16446 |
NimbleGen Mouse DNA Methylation 3x720K CpG Island Plus RefSeq Promoter Array [100718_MM9_CpG_Refseq_Prom_MeDIP] |
| GPL23976 |
Illumina Infinium HumanMethylation850 BeadChip |
|
| Samples (33)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE98531 |
DNA methylation instability by BRAF-mediated TET silencing and lifestyle-exposure divides colon cancer pathways [tumor, paired normal] |
| GSE98532 |
DNA methylation instability by BRAF-mediated TET silencing and lifestyle-exposure divides colon cancer pathways [3 cell lines] |
| GSE98533 |
DNA methylation instability by BRAF-mediated TET silencing and lifestyle-exposure divides colon cancer pathways [Caco2 cell line] |
| GSE108606 |
DNA methylation instability by BRAF-mediated TET silencing and lifestyle-exposure divides colon cancer pathways [BrafV637E knock-in ] |
| GSE124915 |
DNA methylation instability by BRAF-mediated TET silencing and lifestyle-exposure divides colon cancer pathways [Colo320 cell line] |
|
| Relations |
| BioProject |
PRJNA385362 |
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