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Series GSE99303 Query DataSets for GSE99303
Status Public on Nov 01, 2017
Title Glass promotes the differentiation of both neuronal and non-neuronal cells in the Drosophila eye
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary Multiple cell types can be specified from a single pool of progenitors through the combinatorial activity of transcriptional regulators, which activate distinct developmental programs to establish different cell fates. The zinc finger transcription factor Glass is required
for neuronal progenitors in the Drosophila eye imaginal disc to acquire a photoreceptor identity. Glass is also expressed in non-neuronal cone and pigment cells, but its role in these cells is unknown. To examine how Glass activity is affected by the cellular context, we
misexpressed it in different tissues. When expressed in neuroblasts of the larval brain or in epithelial cells of the wing disc, Glass activated both a common core set of target genes and distinct gene sets specific to each tissue. In addition to photoreceptor-specific genes, Glass
induced markers of cone and pigment cells. Cell type-specific glass mutations generated in cone or pigment cells using somatic CRISPR revealed autonomous developmental defects, and expressing Glass specifically in these cells partially rescued glass mutant phenotypes. Glass thus
acts in both neuronal and non-neuronal cells to promote their differentiation into functional components of the eye, suggesting that it is a determinant of organ identity.
 
Overall design 6 samples in triplicate, 2 experimental (Glass misexpression (Gl ME) in the wing and Gl ME in the brain), 4 controls (wild-type (WT) eye discs, WT wing discs and WT brains and gl60j brains)
Drosophila melanogaster imaginal discs were isolated from Wandering 3rd Instar larvae (W3L) raised at 25C. Gl ME= Glass Misexpression, WT= wild-type. UAS-gl was expressed with tubulin (tub)-GAL4 in clones generated in the wing using Ultrabithorax-Flippase (Ubx-FLP).
The inscuteable (insc)-GAL4 driver was used to misexpress Gl in the larval brain in a gl60j background.
 
Contributor(s) Morrison CA, Chen H, Brown S, Treisman JE
Citation(s) 29324767
NIH grant(s)
Grant ID Grant title Affiliation Name
F31 EY025129 Identifying the transcriptional core logic that determines photoreceptor cell specification NEW YORK UNIVERSITY SCHOOL OF MEDICINE Carolyn Arlene Morrison
R21 EY024826 Photoreceptor cell fate specification by the Glass transcription factor NEW YORK UNIVERSITY SCHOOL OF MEDICINE Jessica E Treisman
R01 EY013777 Pattern Formation in the Drosophila Eye Disc NEW YORK UNIVERSITY SCHOOL OF MEDICINE Jessica E Treisman
Submission date May 25, 2017
Last update date May 15, 2019
Contact name Carolyn Morrison
E-mail(s) cam849@nyumc.org
Phone 212-263-1031
Organization name NYU School of Medicine
Department Skirball Institute
Lab Treisman
Street address 540 First Ave
City New York
State/province NY
ZIP/Postal code 11746
Country USA
 
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (18)
GSM2640775 wing_Gl_ME_rep1
GSM2640776 wing_Gl_ME_rep2
GSM2640777 wing_Gl_ME_rep3
Relations
BioProject PRJNA388078
SRA SRP108033

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE99303_Glass_data_processed.xlsx.gz 5.5 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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