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Series GSE99313 Query DataSets for GSE99313
Status Public on Sep 22, 2017
Title Genome-wide analysis of YAP and TFCP2 down-regulated genes in liver cancer cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To identify YAP and TFCP2 co-regulated genes, RNA-seq was also performed in Bel-7402 cells before and after knocking down YAP or TFCP2. From the RNA-seq data, 2165 genes were found that were possibly co-regulated by YAP and TFCP2.
 
Overall design Examination of YAP and TFCP2 down-regulated genes in Bel-7402 cells.
 
Contributor(s) Zhang X, Zheng W
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date May 25, 2017
Last update date Jul 25, 2021
Contact name Weisheng Zheng
E-mail(s) wisense@2008.sina.com
Organization name Tongji University
Department Department of Bioinformatics
Lab Jiang Lab
Street address Siping Road, No.1239
City Shanghai
ZIP/Postal code 200092
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (9)
GSM2641020 Control_RNA_rep1
GSM2641021 Control_RNA_rep2
GSM2641022 Control_RNA_rep3
This SubSeries is part of SuperSeries:
GSE99315 Genome-wide analysis of YAP and TFCP2 occupancy and regulated expression in liver cancer cells
Relations
BioProject PRJNA388096
SRA SRP108056

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE99313_RAW.tar 7.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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