|
Status |
Public on Sep 14, 2012 |
Title |
Broad_ChipSeq_Monocytes-CD14+_RO01746_H3K4me3 |
Sample type |
SRA |
|
|
Source name |
Monocytes-CD14+_RO01746
|
Organism |
Homo sapiens |
Characteristics |
donor_id: ENCDO265AAA biomaterial_type: primary cell cell_type: CD14-positive monocyte datatype: ChipSeq datatype description: Chromatin IP Sequencing antibody antibodydescription: rabbit polyclonal. Antibody Target: H3K4me3 antibody targetdescription: Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated. antibody vendorname: 1)abcam; 2)Millipore antibody vendorid: ab8580; 07-473 controlid: wgEncodeEH003130 replicate: 1,2 softwareversion: ScriptureVPaperR3 cell sex: F antibody: H3K4me3 antibody antibodydescription: rabbit polyclonal. Antibody Target: H3K4me3 antibody targetdescription: Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated. antibody vendorname: Millipore antibody vendorid: 07-473 treatment: None treatment description: No special treatment or protocol applies control: std control description: Standard input signal for most experiments. controlid: Monocytes-CD14+_RO01746/Input/std softwareversion: ScriptureVPaperR3
|
Biomaterial provider |
S. Heimfeld Laboratory, FHCRC
|
Treatment protocol |
None
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
|
|
|
Library strategy |
ChIP-Seq |
Library source |
genomic |
Library selection |
ChIP |
Instrument model |
Illumina HiSeq 2000 |
|
|
Data processing |
http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeBroadHistone
|
|
|
Submission date |
Sep 13, 2012 |
Last update date |
Mar 07, 2023 |
Contact name |
ENCODE DCC |
E-mail(s) |
encode-help@lists.stanford.edu
|
Organization name |
ENCODE DCC
|
Street address |
300 Pasteur Dr
|
City |
Stanford |
State/province |
CA |
ZIP/Postal code |
94305-5120 |
Country |
USA |
|
|
Platform ID |
GPL11154 |
Series (1) |
GSE29611 |
Histone Modifications by ChIP-seq from ENCODE/Broad Institute |
|
Relations |
Reanalyzed by |
GSE226811 |
SRA |
SRX186732 |
BioSample |
SAMN01174148 |
Named Annotation |
GSM1003536_hg19_wgEncodeBroadHistoneMonocd14ro1746H3k04me3Sig.bigWig |