|
Status |
Public on Feb 01, 2013 |
Title |
Glioma-EORTC26951 A1372_66.CEL |
Sample type |
RNA |
|
|
Source name |
Glioma, clinical trial RT v RT+PCV
|
Organism |
Homo sapiens |
Characteristics |
tissue: glioma sample: 110 igs: 18 tcga classification: C tissue type: FFPE cimp: CIMP- idhmut: wt 1p19q loh: no loss egfr: amp trt: RT ss (y): 1.59178082191781 event: deceased age: 50 Sex: F original diagnosis: AOD review diagnosis: AOD experiment: pt 1
|
Extracted molecule |
total RNA |
Extraction protocol |
Trizol
|
Label |
biotin
|
Label protocol |
cDNA synthesis and cRNA labeling was done using the alternative protocol for one-cycle cDNA synthesis.Biotin-labeled cRNA was generated using the ENZO Highyield RNA transcript labeling kit (ENZO Life Sciences, Inc., Farmingdale, NY). Affymetrix (Santa Clara, CA)
|
|
|
Hybridization protocol |
standard Affymetrix protocol
|
Scan protocol |
standard Affymetrix protocol
|
Description |
Abbreviations: IGS: intrinsic glioma subtype; Trt: treatment; SS: survival in years; C: classical; P: proneural; M: mesenchymal; N:neural
|
Data processing |
RMA
|
|
|
Submission date |
Dec 21, 2012 |
Last update date |
Feb 01, 2013 |
Contact name |
Pim French |
E-mail(s) |
p.french@erasmusmc.nl
|
Phone |
+31 10 70443 33
|
Organization name |
Erasmus MC
|
Department |
Neurology
|
Lab |
Neurooncology
|
Street address |
Dr Molewaterplein 50
|
City |
Rotterdam |
ZIP/Postal code |
2040CA |
Country |
Netherlands |
|
|
Platform ID |
GPL5188 |
Series (2) |
GSE43107 |
Intrinsic glioma subtypes in EORTC 26951 (part 1) |
GSE43388 |
Intrinsic glioma subtypes in EORTC 26951 |
|