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Sample GSM1067252 Query DataSets for GSM1067252
Status Public on Apr 01, 2013
Title 252800411248-7
Sample type RNA
 
Channel 1
Source name A549 pmiR-67 48h
Organism Homo sapiens
Characteristics cell line: A549
amount in (µg): 0.2
origin: Lung
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy3
Label protocol Agilent - Low RNA input QuickAmp
 
Channel 2
Source name A549 pmiR-210 48h
Organism Homo sapiens
Characteristics cell line: A549
amount in (µg): 0.2
origin: Lung
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy5
Label protocol Agilent - Low RNA input QuickAmp
 
 
Hybridization protocol Agilent : 600.0 ng at 65 degree_C during 17 hours
Scan protocol Arrays were scanned using the Agilent SureScan High Resolution Scanner.
Description A549 pmiR-67 48h vs A549 pmiR-210 48h
Data processing LimmaGUI differential expression analysis with lowess intra-slide normalization and quantile inter-slide normalization.
 
Submission date Jan 18, 2013
Last update date Apr 01, 2013
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL13607
Series (1)
GSE43622 miR-210 promotes a hypoxic phenotype and increases radioresistance in human lung cancer cell lines.

Data table header descriptions
ID_REF
VALUE Log2 of ratio (cy5/cy3)

Data table
ID_REF VALUE
1 0.213856173
2 -0.096272195
3 -0.181569497
4 0.107890805
5 -0.152290863
6 -0.027239803
7 0.277608957
8 0.300237803
9 0.041232135
10 9.46E-05
11 -0.575186195
12 -0.036292716
13 0.396064188
14 0.049623539
15 0.206348707
16 -0.271268188
17 -0.161766943
18 -0.454647865
19 -0.212714959
20 0.108690525

Total number of rows: 62976

Table truncated, full table size 814 Kbytes.




Supplementary file Size Download File type/resource
GSM1067252_US10293826_252800411248_S01_GE2_107_Sep09_2_3.txt.gz 20.8 Mb (ftp)(http) TXT
Processed data included within Sample table

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