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Sample GSM1082224 Query DataSets for GSM1082224
Status Public on May 07, 2014
Title 7770
Sample type RNA
 
Source name Human Bronchial Epithelial Cells
Organism Homo sapiens
Characteristics cell line: HBEC3KT
cell type: Human Bronchial Epithelial Cells
radiation: Si
dose (gray): 0
post radiation time (hour): 12
biological replicate: 09A
technical replicate: A
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with QIAGEN RNeasy Plus mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Bio-rad Experion system.
Label biotin
Label protocol Biotinylated cRNA were prepared with Ambion TotalPrep RNA amplification kit with biotin UTP (Enzo) labeling
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description 4596745034_D
Data processing The data were background subtracted and normalised using MBCB algorithm
 
Submission date Feb 12, 2013
Last update date May 07, 2014
Contact name Lianghao Ding
E-mail(s) lianghao.ding@utsouthwestern.edu
Phone 214-648-5892
Organization name UT Southwestern Medical Center
Street address 5323 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390
Country USA
 
Platform ID GPL13376
Series (1)
GSE44282 Transcriptome Profiles in Normal Human Bronchial Epithelial Cells after Exposure to γ-rays and different HZE particles

Data table header descriptions
ID_REF
VALUE quantile normalized

Data table
ID_REF VALUE
ILMN_1762337 2.77512
ILMN_1736007 3.46748
ILMN_1779670 3.63187
ILMN_1806310 3.11772
ILMN_1671474 3.69056
ILMN_1772582 3.77334
ILMN_1653355 2.97168
ILMN_1787689 3.84557
ILMN_1731507 3.12407
ILMN_1814316 3.37721
ILMN_1745607 3.40322
ILMN_1757454 3.16137
ILMN_1668111 3.9742
ILMN_1735045 6.53407
ILMN_1680754 3.98025
ILMN_1659452 3.08745
ILMN_1767388 6.24089
ILMN_1673870 3.68783
ILMN_1675204 3.17529
ILMN_1755321 7.02157

Total number of rows: 48701

Table truncated, full table size 993 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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