NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1119323 Query DataSets for GSM1119323
Status Public on May 28, 2013
Title MGG23_rep2
Sample type RNA
 
Source name MGG23 human glioblastoma stem cell line
Organism Homo sapiens
Characteristics cell line: MGG23
Treatment protocol None
Growth protocol MGG and NS cells were cultured and passaged using standard neural stem cell conditions as described in the references
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Biotin
Label protocol As recommended by Affymetrix
 
Hybridization protocol As recommended by Affymetrix
Scan protocol As recommended by Affymetrix
Data processing GenePattern RMA, default parameters
 
Submission date Apr 09, 2013
Last update date May 29, 2013
Contact name Esther Rheinbay
E-mail(s) esther@broadinstitute.org
Organization name Broad Institute
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platform ID GPL570
Series (2)
GSE45899 Expression profiling of glioblastoma cancer stem cells
GSE46016 Epigenomic profiling of glioblastoma stem cells

Data table header descriptions
ID_REF
VALUE GenePattern RMA signal intensity

Data table
ID_REF VALUE
1007_s_at 2571.851212
1053_at 761.7486151
117_at 81.75323211
121_at 223.8691333
1255_g_at 25.07610656
1294_at 147.0679829
1316_at 213.1722789
1320_at 95.01230879
1405_i_at 15.05124651
1431_at 23.51182143
1438_at 324.1075377
1487_at 380.374269
1494_f_at 61.13630925
1552256_a_at 1656.78425
1552257_a_at 635.9373397
1552258_at 52.74782197
1552261_at 51.49307674
1552263_at 247.0982454
1552264_a_at 239.1519598
1552266_at 15.72592382

Total number of rows: 54675

Table truncated, full table size 1211 Kbytes.




Supplementary file Size Download File type/resource
GSM1119323_MGG23_rep2.CEL.gz 4.6 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap