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Sample GSM1119324 Query DataSets for GSM1119324
Status Public on May 28, 2013
Title MGG4_rep1
Sample type RNA
 
Source name MGG4 human glioblastoma stem cell line
Organism Homo sapiens
Characteristics cell line: MGG4
Treatment protocol None
Growth protocol MGG and NS cells were cultured and passaged using standard neural stem cell conditions as described in the references
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Biotin
Label protocol As recommended by Affymetrix
 
Hybridization protocol As recommended by Affymetrix
Scan protocol As recommended by Affymetrix
Data processing GenePattern RMA, default parameters
 
Submission date Apr 09, 2013
Last update date May 29, 2013
Contact name Esther Rheinbay
E-mail(s) esther@broadinstitute.org
Organization name Broad Institute
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platform ID GPL570
Series (2)
GSE45899 Expression profiling of glioblastoma cancer stem cells
GSE46016 Epigenomic profiling of glioblastoma stem cells

Data table header descriptions
ID_REF
VALUE GenePattern RMA signal intensity

Data table
ID_REF VALUE
1007_s_at 881.2624905
1053_at 902.6006527
117_at 60.96356653
121_at 246.1970699
1255_g_at 25.22268719
1294_at 99.07408774
1316_at 161.8501687
1320_at 61.58986451
1405_i_at 19.43624659
1431_at 26.81888179
1438_at 145.86482
1487_at 227.4551225
1494_f_at 84.94135331
1552256_a_at 1677.838891
1552257_a_at 1110.919539
1552258_at 62.42232907
1552261_at 32.0384836
1552263_at 219.2794436
1552264_a_at 222.9269019
1552266_at 14.22068444

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM1119324_MGG4_rep1.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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