NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1119325 Query DataSets for GSM1119325
Status Public on May 28, 2013
Title MGG4_rep2
Sample type RNA
 
Source name MGG4 human glioblastoma stem cell line
Organism Homo sapiens
Characteristics cell line: MGG4
Treatment protocol None
Growth protocol MGG and NS cells were cultured and passaged using standard neural stem cell conditions as described in the references
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Biotin
Label protocol As recommended by Affymetrix
 
Hybridization protocol As recommended by Affymetrix
Scan protocol As recommended by Affymetrix
Data processing GenePattern RMA, default parameters
 
Submission date Apr 09, 2013
Last update date May 29, 2013
Contact name Esther Rheinbay
E-mail(s) esther@broadinstitute.org
Organization name Broad Institute
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platform ID GPL570
Series (2)
GSE45899 Expression profiling of glioblastoma cancer stem cells
GSE46016 Epigenomic profiling of glioblastoma stem cells

Data table header descriptions
ID_REF
VALUE GenePattern RMA signal intensity

Data table
ID_REF VALUE
1007_s_at 911.3266215
1053_at 917.9342364
117_at 72.4997265
121_at 266.1498027
1255_g_at 25.27323063
1294_at 105.1683805
1316_at 164.3595857
1320_at 65.95381204
1405_i_at 10.75917645
1431_at 27.00751898
1438_at 168.9964535
1487_at 205.1399566
1494_f_at 75.44457589
1552256_a_at 1521.320551
1552257_a_at 1217.003336
1552258_at 61.09645388
1552261_at 33.56643426
1552263_at 203.3084217
1552264_a_at 183.2159278
1552266_at 12.97065415

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM1119325_MGG4_rep2.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap