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Sample GSM1119326 Query DataSets for GSM1119326
Status Public on May 28, 2013
Title MGG6_rep1
Sample type RNA
 
Source name MGG6 human glioblastoma stem cell line
Organism Homo sapiens
Characteristics cell line: MGG6
Treatment protocol None
Growth protocol MGG and NS cells were cultured and passaged using standard neural stem cell conditions as described in the references
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Biotin
Label protocol As recommended by Affymetrix
 
Hybridization protocol As recommended by Affymetrix
Scan protocol As recommended by Affymetrix
Data processing GenePattern RMA, default parameters
 
Submission date Apr 09, 2013
Last update date May 29, 2013
Contact name Esther Rheinbay
E-mail(s) esther@broadinstitute.org
Organization name Broad Institute
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platform ID GPL570
Series (2)
GSE45899 Expression profiling of glioblastoma cancer stem cells
GSE46016 Epigenomic profiling of glioblastoma stem cells

Data table header descriptions
ID_REF
VALUE GenePattern RMA signal intensity

Data table
ID_REF VALUE
1007_s_at 3637.670346
1053_at 506.4045508
117_at 172.4877112
121_at 706.2661984
1255_g_at 24.50061526
1294_at 171.5184714
1316_at 132.1236363
1320_at 111.4973902
1405_i_at 13.65853959
1431_at 28.51030192
1438_at 620.2819722
1487_at 376.8402504
1494_f_at 130.4721062
1552256_a_at 811.5407792
1552257_a_at 617.2460272
1552258_at 79.97266257
1552261_at 55.96294752
1552263_at 52.94290948
1552264_a_at 457.0779386
1552266_at 18.6871563

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM1119326_MGG6_rep1.CEL.gz 5.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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