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Sample GSM1119327 Query DataSets for GSM1119327
Status Public on May 28, 2013
Title MGG6_rep2
Sample type RNA
 
Source name MGG6 human glioblastoma stem cell line
Organism Homo sapiens
Characteristics cell line: MGG6
Treatment protocol None
Growth protocol MGG and NS cells were cultured and passaged using standard neural stem cell conditions as described in the references
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Biotin
Label protocol As recommended by Affymetrix
 
Hybridization protocol As recommended by Affymetrix
Scan protocol As recommended by Affymetrix
Data processing GenePattern RMA, default parameters
 
Submission date Apr 09, 2013
Last update date May 29, 2013
Contact name Esther Rheinbay
E-mail(s) esther@broadinstitute.org
Organization name Broad Institute
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platform ID GPL570
Series (2)
GSE45899 Expression profiling of glioblastoma cancer stem cells
GSE46016 Epigenomic profiling of glioblastoma stem cells

Data table header descriptions
ID_REF
VALUE GenePattern RMA signal intensity

Data table
ID_REF VALUE
1007_s_at 3443.184921
1053_at 494.5506696
117_at 154.3785445
121_at 778.7390258
1255_g_at 27.46658019
1294_at 178.0738785
1316_at 121.8573232
1320_at 98.91689293
1405_i_at 14.25369399
1431_at 29.20208255
1438_at 643.8492076
1487_at 381.9571783
1494_f_at 137.9612412
1552256_a_at 729.1644808
1552257_a_at 398.5979289
1552258_at 79.65800384
1552261_at 62.41651029
1552263_at 48.48512064
1552264_a_at 404.7860745
1552266_at 19.29925326

Total number of rows: 54675

Table truncated, full table size 1211 Kbytes.




Supplementary file Size Download File type/resource
GSM1119327_MGG6_rep2.CEL.gz 5.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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