NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1119328 Query DataSets for GSM1119328
Status Public on May 28, 2013
Title MGG8_rep1
Sample type RNA
 
Source name MGG8 human glioblastoma stem cell line
Organism Homo sapiens
Characteristics cell line: MGG8
Treatment protocol None
Growth protocol MGG and NS cells were cultured and passaged using standard neural stem cell conditions as described in the references
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Biotin
Label protocol As recommended by Affymetrix
 
Hybridization protocol As recommended by Affymetrix
Scan protocol As recommended by Affymetrix
Data processing GenePattern RMA, default parameters
 
Submission date Apr 09, 2013
Last update date May 29, 2013
Contact name Esther Rheinbay
E-mail(s) esther@broadinstitute.org
Organization name Broad Institute
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platform ID GPL570
Series (2)
GSE45899 Expression profiling of glioblastoma cancer stem cells
GSE46016 Epigenomic profiling of glioblastoma stem cells

Data table header descriptions
ID_REF
VALUE GenePattern RMA signal intensity

Data table
ID_REF VALUE
1007_s_at 1123.929588
1053_at 713.2904305
117_at 219.4282358
121_at 833.5274774
1255_g_at 35.00566999
1294_at 128.9207587
1316_at 132.4334251
1320_at 112.7482633
1405_i_at 14.67525685
1431_at 28.9085676
1438_at 572.1851823
1487_at 305.2585288
1494_f_at 138.8513098
1552256_a_at 1969.170914
1552257_a_at 1011.11467
1552258_at 86.10517462
1552261_at 62.96893338
1552263_at 60.00651558
1552264_a_at 497.3566959
1552266_at 23.7166558

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM1119328_MGG8_rep1.CEL.gz 5.7 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap