NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1119329 Query DataSets for GSM1119329
Status Public on May 28, 2013
Title MGG8_rep2
Sample type RNA
 
Source name MGG8 human glioblastoma stem cell line
Organism Homo sapiens
Characteristics cell line: MGG8
Treatment protocol None
Growth protocol MGG and NS cells were cultured and passaged using standard neural stem cell conditions as described in the references
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Biotin
Label protocol As recommended by Affymetrix
 
Hybridization protocol As recommended by Affymetrix
Scan protocol As recommended by Affymetrix
Data processing GenePattern RMA, default parameters
 
Submission date Apr 09, 2013
Last update date May 29, 2013
Contact name Esther Rheinbay
E-mail(s) esther@broadinstitute.org
Organization name Broad Institute
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platform ID GPL570
Series (2)
GSE45899 Expression profiling of glioblastoma cancer stem cells
GSE46016 Epigenomic profiling of glioblastoma stem cells

Data table header descriptions
ID_REF
VALUE GenePattern RMA signal intensity

Data table
ID_REF VALUE
1007_s_at 1220.38718
1053_at 527.0634391
117_at 229.620179
121_at 827.3595331
1255_g_at 29.02487264
1294_at 137.0409878
1316_at 123.7294597
1320_at 107.4330575
1405_i_at 16.30428184
1431_at 30.21584506
1438_at 465.0294581
1487_at 360.1107948
1494_f_at 129.3202935
1552256_a_at 1428.143692
1552257_a_at 1019.167946
1552258_at 81.36885201
1552261_at 66.38090334
1552263_at 69.48687109
1552264_a_at 549.0205872
1552266_at 18.05681088

Total number of rows: 54675

Table truncated, full table size 1211 Kbytes.




Supplementary file Size Download File type/resource
GSM1119329_MGG8_rep2.CEL.gz 5.6 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap