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Sample GSM1119330 Query DataSets for GSM1119330
Status Public on May 28, 2013
Title MGG8_rep3
Sample type RNA
 
Source name MGG8 human glioblastoma stem cell line
Organism Homo sapiens
Characteristics cell line: MGG8
Treatment protocol None
Growth protocol MGG and NS cells were cultured and passaged using standard neural stem cell conditions as described in the references
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label Biotin
Label protocol As recommended by Affymetrix
 
Hybridization protocol As recommended by Affymetrix
Scan protocol As recommended by Affymetrix
Data processing GenePattern RMA, default parameters
 
Submission date Apr 09, 2013
Last update date May 29, 2013
Contact name Esther Rheinbay
E-mail(s) esther@broadinstitute.org
Organization name Broad Institute
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platform ID GPL570
Series (2)
GSE45899 Expression profiling of glioblastoma cancer stem cells
GSE46016 Epigenomic profiling of glioblastoma stem cells

Data table header descriptions
ID_REF
VALUE GenePattern RMA signal intensity

Data table
ID_REF VALUE
1007_s_at 1013.229529
1053_at 1491.999214
117_at 159.0190371
121_at 218.3900241
1255_g_at 81.26150266
1294_at 105.7400102
1316_at 179.4005
1320_at 102.5990574
1405_i_at 14.60797123
1431_at 30.44512382
1438_at 211.0481305
1487_at 234.9827177
1494_f_at 68.87402294
1552256_a_at 1063.208343
1552257_a_at 1009.098819
1552258_at 65.63835896
1552261_at 71.46540653
1552263_at 265.6583037
1552264_a_at 287.8948737
1552266_at 15.25038555

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM1119330_MGG8_rep3.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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