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GEO accession:
Sample GSM119230
Query DataSets for GSM119230
Status
Public on Sep 27, 2006
Title
5202764005789148112904.G05
Sample type
RNA
Source name
cmap_well:1527
Organism
Homo sapiens
Characteristics
perturbagen: small molecule
type: treatment
name: tretinoin
concentration: .000001 M
vehicle: DMSO
vehicle_final: .1 %
duration: 6 h
cell: MCF7
Extracted molecule
total RNA
Label
biotin
Description
MCF7 treated with tretinoin (.000001 M) for 6 h
Data processing
MAS 5.0
Submission date
Jul 06, 2006
Last update date
Sep 18, 2006
Contact name
Justin Lamb
E-mail(s)
justin@broad.mit.edu
Organization name
Broad Institute
Street address
Seven Cambridge Center
City
Cambridge
State/province
MA
ZIP/Postal code
02142
Country
USA
Platform ID
GPL3921
Series (1)
GSE5258
Connectivity Map dataset (build01)
Data table header descriptions
ID_REF
VALUE
average difference
ABS_CALL
(A)bsent, (P)resent, (M)arginal
Data table
ID_REF
VALUE
ABS_CALL
1007_s_at
803
P
1053_at
267.5
P
117_at
14.5
A
121_at
56.5
P
1255_g_at
1.5
A
1294_at
16
A
1316_at
11.2
A
1320_at
7
A
1405_i_at
21.7
A
1431_at
15.2
A
1438_at
7.7
A
1487_at
105.3
P
1494_f_at
26.7
A
1598_g_at
43.7
P
160020_at
16.4
A
1729_at
105.8
P
1773_at
51.8
P
177_at
5.1
A
179_at
2.8
A
1861_at
86.3
P
Total number of rows:
22268
Table truncated, full table size
389 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM119230.CEL.gz
3.8 Mb
(ftp)
(http)
CEL
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