|
| Status |
Public on Jun 17, 2014 |
| Title |
T47D |
| Sample type |
genomic |
| |
|
| Source name |
breast cancer cell line
|
| Organism |
Homo sapiens |
| Characteristics |
cell line: T47D
cell type: breast cancer
subtype: Luminal cells
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
standard procedure
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
| Description |
HumanMethylation450_2
|
| Data processing |
BeadStudio software
|
| |
|
| Submission date |
Aug 12, 2013 |
| Last update date |
Jun 17, 2014 |
| Contact name |
Kornelia Polyak |
| E-mail(s) |
kornelia_polyak@dfci.harvard.edu
|
| Phone |
617-632-2106
|
| Organization name |
Dana-Farber Cancer Institute
|
| Department |
Medical Oncology
|
| Lab |
Polyak
|
| Street address |
450 Brookline Ave
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02215 |
| Country |
USA |
| |
|
| Platform ID |
GPL13534 |
| Series (2) |
| GSE46073 |
Gene expression and genome-wide location analysis of breast cancer cell-lines |
| GSE49794 |
DNA methylation analysis of breast cancer cell-lines |
|
