NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1229523 Query DataSets for GSM1229523
Status Public on Sep 12, 2013
Title HUVEC 1 [June 2012]
Sample type RNA
 
Source name HUVEC 1
Organism Homo sapiens
Characteristics cell type: Human umbilical venous endothelial cells
Treatment protocol Lentiviral transduction of ER71/ETV2
Growth protocol Standard mammalian cell cultrure methods
Extracted molecule total RNA
Extraction protocol TRIzol reagent (Invitrogen, Carlsbad, CA)
Label biotin
Label protocol Samples are labeled according to the GeneChip® PrimeView™ Human Gene Expression Array labeling protocol by the Core Genomics Facility, University of Illinois at Chicago.
 
Hybridization protocol Samples were hybridized according to the GeneChip® PrimeView™ Human Gene Expression Array protocol by the Core Genomics Facility, University of Illinois at Chicago.
Scan protocol Samples were scanned according to the GeneChip® PrimeView™ Human Gene Expression Array protocol by the Core Genomics Facility, University of Illinois at Chicago.
Description Gene expression data from HUVECs
Data processing Partek Genomics Suite was used for data processing. RMA was used for normalization algorithm and background corrected log2 transformed signals for all samples.
 
Submission date Sep 11, 2013
Last update date Sep 12, 2013
Contact name Young-sup Yoon
E-mail(s) yyoon5@emory.edu
Organization name Emory University
Department Medicine
Lab Yoon Lab
Street address 101 Woodruff Cir
City Atlanta
State/province Georgia
ZIP/Postal code 30322
Country USA
 
Platform ID GPL15207
Series (1)
GSE50801 ER71/ETV2-mediated direct reprogramming of human dermal fibroblasts (HDFs) into endothelial-like cells

Data table header descriptions
ID_REF
VALUE log2 RMA normalized signal

Data table
ID_REF VALUE
11715100_at 3.14962
11715101_s_at 4.08129
11715102_x_at 3.29123
11715103_x_at 6.05195
11715104_s_at 3.65061
11715105_at 2.9644
11715106_x_at 3.24919
11715107_s_at 3.90906
11715108_x_at 2.92388
11715109_at 2.98796
11715110_at 3.6032
11715111_s_at 6.59046
11715112_at 2.65019
11715113_x_at 6.07344
11715114_x_at 5.85548
11715115_s_at 2.6027
11715116_s_at 2.93871
11715117_x_at 2.50392
11715118_s_at 2.55062
11715119_s_at 7.92403

Total number of rows: 49395

Table truncated, full table size 1033 Kbytes.




Supplementary file Size Download File type/resource
GSM1229523_PAR062512-A1-PrimeView-071912_PrimeView_.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap