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Sample GSM1229526 Query DataSets for GSM1229526
Status Public on Sep 12, 2013
Title KDR+ cells-2 [June 2012]
Sample type RNA
 
Source name KDR+ cells from ER71 transduced HDF at D7
Organism Homo sapiens
Characteristics cell type: reprogrammed cells
Treatment protocol Lentiviral transduction of ER71/ETV2
Growth protocol Standard mammalian cell cultrure methods
Extracted molecule total RNA
Extraction protocol TRIzol reagent (Invitrogen, Carlsbad, CA)
Label biotin
Label protocol Samples are labeled according to the GeneChip® PrimeView™ Human Gene Expression Array labeling protocol by the Core Genomics Facility, University of Illinois at Chicago.
 
Hybridization protocol Samples were hybridized according to the GeneChip® PrimeView™ Human Gene Expression Array protocol by the Core Genomics Facility, University of Illinois at Chicago.
Scan protocol Samples were scanned according to the GeneChip® PrimeView™ Human Gene Expression Array protocol by the Core Genomics Facility, University of Illinois at Chicago.
Description Gene expression data from KDR+ cells derived from ER71 transduced HDFs
Data processing Partek Genomics Suite was used for data processing. RMA was used for normalization algorithm and background corrected log2 transformed signals for all samples.
 
Submission date Sep 11, 2013
Last update date Sep 12, 2013
Contact name Young-sup Yoon
E-mail(s) yyoon5@emory.edu
Organization name Emory University
Department Medicine
Lab Yoon Lab
Street address 101 Woodruff Cir
City Atlanta
State/province Georgia
ZIP/Postal code 30322
Country USA
 
Platform ID GPL15207
Series (1)
GSE50801 ER71/ETV2-mediated direct reprogramming of human dermal fibroblasts (HDFs) into endothelial-like cells

Data table header descriptions
ID_REF
VALUE log2 RMA normalized signal

Data table
ID_REF VALUE
11715100_at 2.9825
11715101_s_at 4.15998
11715102_x_at 3.17963
11715103_x_at 4.9672
11715104_s_at 3.50724
11715105_at 2.89084
11715106_x_at 3.19703
11715107_s_at 3.84102
11715108_x_at 2.87778
11715109_at 2.89304
11715110_at 3.32831
11715111_s_at 6.58572
11715112_at 2.7778
11715113_x_at 6.27318
11715114_x_at 6.10858
11715115_s_at 2.66391
11715116_s_at 2.99271
11715117_x_at 2.32358
11715118_s_at 2.73613
11715119_s_at 6.37743

Total number of rows: 49395

Table truncated, full table size 1033 Kbytes.




Supplementary file Size Download File type/resource
GSM1229526_PAR062512-C2-PrimeView-071912_PrimeView_.CEL.gz 1.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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