|
| Status |
Public on Nov 12, 2013 |
| Title |
ROTT_BI_613.2 |
| Sample type |
genomic |
| |
|
| Source name |
blood
|
| Organism |
Canis lupus familiaris |
| Characteristics |
breed: rottweiler
gender: female
tissue: blood
disease state: osteosarcoma-free
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was isolated from whole blood (QIAamp DNA Midi kit).
|
| Label |
biotin
|
| Label protocol |
Standard Illumina protocol for Infinium HD Beadchip
|
| |
|
| Hybridization protocol |
Standard Illumina protocol for Infinium HD Beadchip
|
| Scan protocol |
Illumina iScan with Dual-Scanner Autoloader
|
| Description |
Genomic DNA extracted from blood was genotyped using the Illumina CanineHD Genotyping BeadChip
|
| Data processing |
Illumina GenomeStudio Version 2011.1 with Genotyping Module 1.9.4
|
| |
|
| Submission date |
Oct 31, 2013 |
| Last update date |
Nov 12, 2013 |
| Contact name |
Elinor Karlsson |
| E-mail(s) |
elinor@broadinstitute.org
|
| Organization name |
Broad Institute
|
| Street address |
7 Cambridge Center
|
| City |
Cambridge |
| State/province |
MA |
| ZIP/Postal code |
02142 |
| Country |
USA |
| |
|
| Platform ID |
GPL17481 |
| Series (2) |
| GSE51976 |
Dataset #2 for genome-wide analysis of heritable dog osteosarcoma in 3 breeds |
| GSE52147 |
Genome-wide analysis of heritable dog osteosarcoma in 3 breeds |
|
