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GEO accession:
Sample GSM136123
Query DataSets for GSM136123
Status
Public on Sep 16, 2006
Title
Human Immature Dendritic Cells
Sample type
SAGE
Anchor
NlaIII
Tag Count
58699
Tag Length
10
Source name
monocyte-derived immature dendritic cells
Organism
Homo sapiens
Characteristics
healthy donor
Extracted molecule
total RNA
Description
To generate immature dendritic cells, monocytes were cultured in RPMI 1640 containing 7.5% FCS in the presense of GM-CSF(500 unit/ml), IL-4(100 unit/ml), and TNF-alpha(50unit/ml) for 5 days.
Submission date
Sep 14, 2006
Last update date
Nov 19, 2008
Contact name
Shinichi Hashimoto
E-mail(s)
hashimot@m.u-tokyo.ac.jp
Phone
+81-3-5841-3434
Fax
+81-3-5841-3393
Organization name
The University of Tokyo
Department
Graduate School of Medicine
Street address
7-3-1 Hongo, Bunkyo-ku
City
Tokyo
ZIP/Postal code
113-0033
Country
Japan
Platform ID
GPL4
Series (1)
GSE5833
Human Leukocytes SAGE
Data table header descriptions
TAG
Ten base SAGE tag
COUNT
Absolute tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
GTTCACATTA
978
16661.27
CCCTGGGTTC
849
14463.62
GGGCATCTCT
686
11686.74
TTGGTGAAGG
500
8518.03
CCTGTAATCC
466
7938.81
TGCCTGCACC
447
7615.12
CAAGCATCCC
442
7529.94
TTGGTCCTCT
439
7478.83
TTGGGGTTTC
404
6882.57
GTGAAACCCC
334
5690.05
CTAAGACTTC
327
5570.79
GTGACCACGG
319
5434.50
CCACTGCACT
306
5213.04
GGGGAAATCG
281
4787.13
GTTGTGGTTA
263
4480.49
TGTGTTGAGA
261
4446.41
CCCATCGTCC
249
4241.98
TTCATACACC
244
4156.80
GTGAAACCCT
207
3526.47
TCCAAATCGA
193
3287.96
Total number of rows:
17896
Table truncated, full table size
334 Kbytes
.
Supplementary data files not provided
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