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GEO accession:
Sample GSM136124
Query DataSets for GSM136124
Status
Public on Sep 16, 2006
Title
Human Mature Dendritic Cells
Sample type
SAGE
Anchor
NlaIII
Tag Count
31861
Tag Length
10
Source name
monocyte-derived mature dendritic cells
Organism
Homo sapiens
Characteristics
healthy donor
Extracted molecule
total RNA
Description
To generate mature dendritic cells, human monocytes were cultured in RPMI 1640 containing 7.5% FCS in the presense of GM-CSF(500 unit/ml), IL-4(100 unit/ml) for 5 days and stimulated with LPS for 2 days.
Submission date
Sep 14, 2006
Last update date
Nov 19, 2008
Contact name
Shinichi Hashimoto
E-mail(s)
hashimot@m.u-tokyo.ac.jp
Phone
+81-3-5841-3434
Fax
+81-3-5841-3393
Organization name
The University of Tokyo
Department
Graduate School of Medicine
Street address
7-3-1 Hongo, Bunkyo-ku
City
Tokyo
ZIP/Postal code
113-0033
Country
Japan
Platform ID
GPL4
Series (1)
GSE5833
Human Leukocytes SAGE
Data table header descriptions
TAG
Ten base SAGE tag
COUNT
Absolute tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
GGCACAAAGG
833
26144.82
TTGGGGTTTC
815
25579.86
GTTGTGGTTA
650
20401.12
AACGGGGCCC
331
10388.88
GTTCACATTA
267
8380.15
GGGGAAATCG
253
7940.74
CCTGTAATCC
237
7438.56
CAAATCCAAA
213
6685.29
TGTGTTGAGA
211
6622.52
TTGGTGAAGG
204
6402.81
CTGACCTGTG
183
5743.70
CCCTGGGTTC
177
5555.38
GTGCGCTGAG
173
5429.84
GGCTGGGGGC
168
5272.90
CCCATCGTCC
165
5178.75
GTGAAACCCC
155
4864.88
CAAGCATCCC
152
4770.72
ATAGTAGCTT
147
4613.79
CCACTGCACT
147
4613.79
GCTTTATTTG
127
3986.06
Total number of rows:
10942
Table truncated, full table size
204 Kbytes
.
Supplementary data files not provided
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