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Status
Public on Oct 01, 2007
Title
Low Group, Line 1, Replicate 1, Female
Sample type
RNA
Source name
Female Drosophila adults, age 3-7 days
Organism
Drosophila melanogaster
Characteristics
artificially selected, wild-derived lines
Extracted molecule
total RNA
Extraction protocol
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label
biotin
Description
Gene expression data from adult female flies of the low group of an artificial selection experiment for locomotion.
Data processing
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date
Oct 03, 2006
Last update date
Oct 03, 2006
Contact name
Katherine W Jordan
E-mail(s)
kwjordan@ncsu.edu
Phone
919-515-5833
Organization name
North Carolina State University
Department
Genetics
Lab
Mackay
Street address
Campus Box 7614
City
Raleigh
State/province
NC
ZIP/Postal code
27695
Country
USA
Platform ID
GPL1322
Series (1)
GSE5956
Expression data from Drosophila subjected to artificial selection on locomotion
Data table header descriptions
ID_REF
Probe Set ID for Affymetrix Drosophila GeneChip 2.0
VALUE
MAS5-calculated Signal intensity
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
1616608_a_at
14512.1
P
0.0005
1622892_s_at
455.7
P
0.0012
1622893_at
10743.8
P
0.0005
1622894_at
189.0
M
0.0547
1622895_at
709.8
P
0.0055
1622896_at
428.2
P
0.0005
1622897_at
22.9
A
0.2968
1622898_a_at
784.2
P
0.0005
1622899_at
58.2
P
0.0018
1622900_at
22.7
A
0.2968
1622901_at
398.7
P
0.0055
1622902_at
595.7
P
0.0278
1622903_s_at
644.2
P
0.0005
1622904_at
50.0
P
0.0278
1622905_at
5.7
A
0.7245
1622906_at
944.4
P
0.0008
1622907_at
692.6
P
0.0006
1622908_a_at
238.3
P
0.0177
1622909_at
1308.4
P
0.0005
1622910_at
22.0
A
0.6112
Total number of rows: 18769 Table truncated, full table size 474 Kbytes .Supplementary data files not provided